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  5. lcl|BLLF01000052.1_cds_GFH06723.1_1200

lcl|BLLF01000052.1_cds_GFH06723.1_1200 (HaLaN_01399, GFH06723)


Aliases : HaLaN_01399, GFH06723

Description : R-SNARE protein, Sec22-family


Gene families : OG_01_0003502 (OrthoFinder) Phylogenetic Tree(s): OG0003502_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000052.1_cds_GFH06723.1_1200
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000042.86 tig00000042_g15484.t1 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder
Cre12.g554700 30792007 Vesicle trafficking.SNARE target membrane recognition... 0.05 OrthoFinder
Cz07g08290.t1 No alias Longin domain [Interproscan]. 0.04 OrthoFinder
Vocar.0007s0359.1 32887837 Longin domain; Synaptobrevin [Interproscan]. 0.02 OrthoFinder
XM_003059973.1 MicpuC2_34180, 34180 Longin domain; Synaptobrevin [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
CC GO:0035145 exon-exon junction complex IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001388 Synaptobrevin 133 193
IPR010908 Longin_dom 46 118
No external refs found!