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  5. lcl|BLLF01000045.1_cds_GFH06580.1_1057

lcl|BLLF01000045.1_cds_GFH06580.1_1057 (HaLaN_01233, GFH06580)


Aliases : HaLaN_01233, GFH06580

Description : RNA-binding protein Musashi 1


Gene families : OG_01_0000350 (OrthoFinder) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000045.1_cds_GFH06580.1_1057
Cluster HCCA: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
Cz12g11070.t1 No alias RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
Dusal.0100s00014.1 33202467 RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_55566 55566 RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s1049.1 32884331 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000361.1_cds_GFH10954.1_5431 HaLaN_06360, GFH10954 RNA recognition motif domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01000394.1_cds_GFH11342.1_5819 HaLaN_06825, GFH11342 RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01003497.1_cds_GFH27497.1_21974 HaLaN_25827, GFH27497 RNA recognition motif domain [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 20 78
No external refs found!