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  5. lcl|BLLF01000010.1_cds_GFH05839.1_316

lcl|BLLF01000010.1_cds_GFH05839.1_316 (HaLaN_00369, GFH05839)


Aliases : HaLaN_00369, GFH05839

Description : 40S ribosomal protein S19


Gene families : OG_01_0003297 (OrthoFinder) Phylogenetic Tree(s): OG0003297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000010.1_cds_GFH05839.1_316
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Cz11g12080.t1 No alias Ribosomal protein S19e [Interproscan]. 0.02 OrthoFinder
OT_11G02460.1 No alias Ribosomal protein S19e [Interproscan]. 0.01 OrthoFinder
XM_003061489.1 MicpuC2_49693, 49693 Ribosomal protein S19e [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006825 copper ion transport IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0035434 copper ion transmembrane transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001266 Ribosomal_S19e 2 59
No external refs found!