1. Home
  2. Species
  3. Haematococcus lacustris
  4. Sequence
  5. lcl|BLLF01000001.1_cds_GFH05551.1_28

lcl|BLLF01000001.1_cds_GFH05551.1_28 (HaLaN_00031, GFH05551)


Aliases : HaLaN_00031, GFH05551

Description : Protein transport protein Sec61 subunit alpha


Gene families : OG_01_0002411 (OrthoFinder) Phylogenetic Tree(s): OG0002411_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|BLLF01000001.1_cds_GFH05551.1_28
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000836.9 tig00000836_g4693.t1 Protein translocation.endoplasmic... 0.02 OrthoFinder
Cre03.g171350 30787936, SEC61A Protein translocation.endoplasmic... 0.02 OrthoFinder
Cz01g29020.t1 No alias Translocon Sec61/SecY, plug domain; SecY/SEC61-alpha... 0.02 OrthoFinder
Dusal.0118s00007.1 33199946 SecY/SEC61-alpha family; Translocon Sec61/SecY, plug... 0.09 OrthoFinder
EOD26277 No alias Translocon Sec61/SecY, plug domain; SecY/SEC61-alpha... 0.02 OrthoFinder
OT_15G02140.1 No alias SecY/SEC61-alpha family; Translocon Sec61/SecY, plug... 0.02 OrthoFinder
PTI_27G00750.1 No alias SecY/SEC61-alpha family; Translocon Sec61/SecY, plug... 0.02 OrthoFinder
Transcript_contig_54530 54530 SecY/SEC61-alpha family; Translocon Sec61/SecY, plug... 0.01 OrthoFinder
XM_003060576.1 MicpuC2_34543, 34543 Type II secretory pathway family protein 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61345.1_350 PRW61345 Transport Sec61 subunit alpha-like 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR019561 Translocon_Sec61/SecY_plug_dom 41 75
IPR002208 SecY/SEC61-alpha 76 459
No external refs found!