Description : Photosynthesis system II assembly factor Ycf48/Hcf136-like domain [Interproscan].
Gene families : OG_01_0003736 (OrthoFinder) Phylogenetic Tree(s): OG0003736_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EOD42170 | |
Cluster | HCCA: Cluster_210 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Sro5_g004430.1 | Contig4001.g30758 | II stability/assembly factor HCF136, chloroplastic | 0.02 | OrthoFinder | |
Vocar.0002s0344.1 | 32890876 | Photosynthesis system II assembly factor... | 0.02 | OrthoFinder | |
XM_002502020.1 | MICPUN_58459, 58459 | Photosynthesis system II assembly factor... | 0.02 | OrthoFinder | |
XM_003057421.1 | MicpuC2_32576, 32576 | Photosynthesis system II assembly factor... | 0.02 | OrthoFinder | |
lcl|LHPG02000001.1_cds_PRW61576.1_616 | PRW61576 | Photosystem II stability assembly factor chloroplastic | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Enrichment |
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003674 | molecular_function | IEP | Enrichment |
MF | GO:0004392 | heme oxygenase (decyclizing) activity | IEP | Enrichment |
MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
BP | GO:0006555 | methionine metabolic process | IEP | Enrichment |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006788 | heme oxidation | IEP | Enrichment |
BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Enrichment |
MF | GO:0010181 | FMN binding | IEP | Enrichment |
MF | GO:0016491 | oxidoreductase activity | IEP | Enrichment |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Enrichment |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Enrichment |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
MF | GO:0016832 | aldehyde-lyase activity | IEP | Enrichment |
MF | GO:0016851 | magnesium chelatase activity | IEP | Enrichment |
MF | GO:0016887 | ATPase | IEP | Enrichment |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
BP | GO:0042168 | heme metabolic process | IEP | Enrichment |
BP | GO:0042440 | pigment metabolic process | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | Enrichment |
MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | Enrichment |
BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
MF | GO:0071949 | FAD binding | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR028203 | PSII_CF48-like_dom | 68 | 389 |
No external refs found! |