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  5. EOD41602

EOD41602


Description : Pescadillo [Interproscan].


Gene families : OG_01_0002850 (OrthoFinder) Phylogenetic Tree(s): OG0002850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD41602
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020961.62 tig00020961_g16684.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder
Cre16.g683793 30777184 Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder
Cz07g04070.t1 No alias Pescadillo [Interproscan]. 0.1 OrthoFinder
Dusal.0374s00011.1 33192015 Pescadillo [Interproscan]. 0.05 OrthoFinder
OT_01G06050.1 No alias Pescadillo; BRCT domain [Interproscan]. 0.09 OrthoFinder
PTI_13G00670.1 No alias Pescadillo [Interproscan]. 0.08 OrthoFinder
Sro810_g205800.1 Contig3420.g26658 Pescadillo homolog 0.14 OrthoFinder
TP06G07510.1 No alias Pescadillo; BRCT domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_192 192 Pescadillo [Interproscan]. 0.04 OrthoFinder
Vocar.0023s0027.1 32883220 Pescadillo [Interproscan]. 0.07 OrthoFinder
XM_002508693.1 MICPUN_66594, 66594 Pescadillo [Interproscan]. 0.04 OrthoFinder
XM_003062980.1 MicpuC2_44858, 44858 Pescadillo; BRCT domain [Interproscan]. 0.08 OrthoFinder
lcl|BLLF01009235.1_cds_GFH33660.1_28137 HaLaN_33062, GFH33660 Pescadillo homolog 0.05 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18309.1_5807 PRW18309 Pescadillo-family BRCT domain-containing 0.08 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495748.1_1746 KAA8495748 Pescadillo-like 0.06 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR010613 PES 97 165
No external refs found!