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EOD40567


Description : Putative Methylmalonyl-coenzyme A mutase [Ensembl].


Gene families : OG_01_0003578 (OrthoFinder) Phylogenetic Tree(s): OG0003578_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD40567
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_55137 55137 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic... 0.01 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492796.1_2532 KAA8492796 Putative methylmalonyl-CoA mutase, mitochondrial 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016866 intramolecular transferase activity IEA Interproscan
MF GO:0031419 cobalamin binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR006158 Cobalamin-bd 308 419
IPR006099 MeMalonylCoA_mutase_a/b_cat 1 265
No external refs found!