EOD40544

Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].

Gene families : OG_01_0000107 (OrthoFinder) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD40544
Cluster	HCCA: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
Cz01g16070.t1	No alias	DEAD/DEAH box helicase domain [Interproscan].	0.02	OrthoFinder
Dusal.0209s00011.1	33199677	Helicase, C-terminal; ATP-dependent DNA helicase RecQ,...	0.02	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8497576.1_6529	KAA8497576	ATP-dependent DNA helicase RecQ	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004363	glutathione synthase activity	IEP	Enrichment
MF	GO:0005534	galactose binding	IEP	Enrichment
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Enrichment
BP	GO:0006749	glutathione metabolic process	IEP	Enrichment
BP	GO:0006750	glutathione biosynthetic process	IEP	Enrichment
BP	GO:0006790	sulfur compound metabolic process	IEP	Enrichment
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Enrichment
MF	GO:0016881	acid-amino acid ligase activity	IEP	Enrichment
BP	GO:0019184	nonribosomal peptide biosynthetic process	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Enrichment
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Enrichment
MF	GO:0048029	monosaccharide binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	227	286
IPR011545	DEAD/DEAH_box_helicase_dom	8	154

External Links

No external refs found!