EOD40393

Description : ABC transporter-like; ABC-2 type transporter [Interproscan].

Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD40393
Cluster	HCCA: Cluster_84

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021582.39	tig00021582_g22636.t1	ABC transporter G family member 22 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cz06g29050.t1	No alias	ABC transporter-like [Interproscan].	0.01	OrthoFinder
Cz13g20060.t1	No alias	Hypothetical protein	0.01	OrthoFinder
Cz14g16020.t1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.01	OrthoFinder
EOD34886	No alias	ABC transporter-like; ABC-2 type transporter [Interproscan].	0.04	OrthoFinder
Sro192_g082460.1	Contig482.g6512	Putative white-brown complex homolog protein 30	0.01	OrthoFinder
Sro7_g006000.1	Contig389.g5253	Putative white-brown complex homolog protein 30	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Enrichment
BP	GO:0006810	transport	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
MF	GO:0033218	amide binding	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
BP	GO:0051179	localization	IEP	Enrichment
BP	GO:0051234	establishment of localization	IEP	Enrichment
MF	GO:0120227	acyl-CoA binding	IEP	Enrichment
MF	GO:1901567	fatty acid derivative binding	IEP	Enrichment
MF	GO:1901681	sulfur compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	51	204
IPR013525	ABC_2_trans	346	551

External Links

No external refs found!