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  5. EOD40079

EOD40079


Description : Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal [Interproscan].


Gene families : OG_01_0002830 (OrthoFinder) Phylogenetic Tree(s): OG0002830_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD40079
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.49 tig00000194_g14777.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder
Cre14.g621450 30776682, RPL5 Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder
Cz10g29210.t1 No alias Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.04 OrthoFinder
Dusal.0029s00017.1 33203768 Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.03 OrthoFinder
OT_15G01250.1 No alias Ribosomal protein L5 eukaryotic/L18 archaeal,... 0.05 OrthoFinder
PTI_01G05820.1 No alias Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.07 OrthoFinder
Sro872_g213940.1 Contig2262.g18776 60S ribosomal protein L5 0.07 OrthoFinder
SymbC1.scaffold1162.12 1162.12 Ribosomal protein L5 eukaryotic/L18 archaeal,... 0.02 OrthoFinder
TP18G00890.1 No alias Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.04 OrthoFinder
Transcript_contig_79973 79973 Ribosomal protein L5 eukaryotic/L18 archaeal [Interproscan]. 0.02 OrthoFinder
Vocar.0004s0107.1 32889418 Ribosomal protein L5 eukaryotic/L18 archaeal,... 0.03 OrthoFinder
XM_002501895.1 MICPUN_108173, 108173 Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.06 OrthoFinder
XM_003057549.1 MicpuC2_49536, 49536 Ribosomal protein L5 eukaryotic/L18 archaeal; Ribosomal... 0.03 OrthoFinder
lcl|BLLF01000001.1_cds_GFH05536.1_13 HaLaN_00015, GFH05536 Ribosomal_L18_c domain-containing protein 0.04 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495592.1_1590 KAA8495592 60S ribosomal protein L5 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR025607 Rbsml_L5e/L18P_C 2 75
No external refs found!