EOD40032


Description : Ribosomal protein S8 [Ensembl].


Gene families : OG_01_0003009 (OrthoFinder) Phylogenetic Tree(s): OG0003009_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD40032
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000158.110 tig00000158_g10212.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 OrthoFinder
Cre05.g234637 30782975 Protein biosynthesis.cytosolic ribosome.small subunit... 0.19 OrthoFinder
Cz14g19140.t1 No alias Ribosomal protein S8 [Interproscan]. 0.14 OrthoFinder
Dusal.0068s00005.1 33187240 Ribosomal protein S8 [Interproscan]. 0.11 OrthoFinder
OT_01G02380.1 No alias Ribosomal protein S8 [Interproscan]. 0.13 OrthoFinder
PTI_26G00870.1 No alias Ribosomal protein S8 [Interproscan]. 0.16 OrthoFinder
Sro60_g034790.1 Contig797.g8956 40S ribosomal protein S15a 0.19 OrthoFinder
SymbC1.scaffold3882.8 3882.8 Ribosomal protein S8 [Interproscan]. 0.04 OrthoFinder
TP10G03670.1 No alias Ribosomal protein S8 [Interproscan]. 0.14 OrthoFinder
Transcript_contig_80036 80036 Ribosomal protein S8 [Interproscan]. 0.04 OrthoFinder
Vocar.0008s0416.1 32897070 Ribosomal protein S8 [Interproscan]. 0.02 OrthoFinder
XM_002507541.1 MICPUN_107532, 107532 Ribosomal protein S8 [Interproscan]. 0.13 OrthoFinder
XM_003056509.1 MicpuC2_31862, 31862 Ribosomal protein S8 [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000519.1_cds_GFH12596.1_7073 HaLaN_08309, GFH12596 40S ribosomal protein S15a 0.13 OrthoFinder
lcl|LHPG02000004.1_cds_PRW58777.1_7006 PRW58777 40S ribosomal S15a-1 0.16 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495085.1_3615 KAA8495085 40S ribosomal protein S15a 0.13 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0006848 pyruvate transport IEP Enrichment
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901475 pyruvate transmembrane transport IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 4 104
No external refs found!