EOD39562


Description : PLAA family ubiquitin binding domain; PUL domain; WD40 repeat [Interproscan].


Gene families : OG_01_0002216 (OrthoFinder) Phylogenetic Tree(s): OG0002216_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD39562
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
PTI_01G02800.1 No alias PLAA family ubiquitin binding domain; PUL domain; WD40... 0.05 OrthoFinder
Sro495_g154490.1 Contig3243.g25629 Phospholipase A-2-activating protein 0.04 OrthoFinder
Vocar.0104s0007.1 32896538 PUL domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0009894 regulation of catabolic process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
BP GO:0042176 regulation of protein catabolic process IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
CC GO:1905369 endopeptidase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 187 213
IPR001680 WD40_repeat 217 253
IPR001680 WD40_repeat 144 183
IPR001680 WD40_repeat 104 139
IPR001680 WD40_repeat 61 97
IPR001680 WD40_repeat 13 49
IPR015155 PFU 290 412
IPR013535 PUL_dom 508 766
No external refs found!