Description : Proteasome, subunit alpha/beta [Interproscan].
Gene families : OG_01_0002755 (OrthoFinder) Phylogenetic Tree(s): OG0002755_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EOD39539 | |
Cluster | HCCA: Cluster_103 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00021357.40 | tig00021357_g20766.t1 | Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana | 0.1 | OrthoFinder | |
Cre08.g373250 | 30773949, POA2 | Protein degradation.26S proteasome.20S core... | 0.13 | OrthoFinder | |
Cz05g10060.t1 | No alias | Proteasome, subunit alpha/beta; Proteasome... | 0.09 | OrthoFinder | |
Dusal.0724s00005.1 | 33190221 | Proteasome, subunit alpha/beta; Proteasome... | 0.02 | OrthoFinder | |
OT_06G00220.1 | No alias | Proteasome, subunit alpha/beta [Interproscan]. | 0.06 | OrthoFinder | |
PTI_25G01000.1 | No alias | Proteasome, subunit alpha/beta; Proteasome... | 0.04 | OrthoFinder | |
Sro63_g035860.1 | Contig2778.g22351 | Proteasome subunit alpha | 0.17 | OrthoFinder | |
TP22G01710.1 | No alias | Proteasome, subunit alpha/beta; Proteasome... | 0.1 | OrthoFinder | |
Vocar.0043s0030.1 | 32886890 | Proteasome alpha-subunit, N-terminal domain; Proteasome,... | 0.07 | OrthoFinder | |
XM_002500738.1 | MICPUN_56599, 56599 | Proteasome, subunit alpha/beta [Interproscan]. | 0.1 | OrthoFinder | |
XM_003059320.1 | MicpuC2_49610, 49610 | Proteasome, subunit alpha/beta [Interproscan]. | 0.03 | OrthoFinder | |
lcl|BLLF01002018.1_cds_GFH22338.1_16815 | HaLaN_19789, GFH22338 | Proteasome subunit alpha type | 0.02 | OrthoFinder | |
lcl|LHPG02000012.1_cds_PRW44892.1_1655 | PRW44892 | 20S proteasome alpha subunit B | 0.04 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498323.1_7276 | KAA8498323 | Proteasome subunit alpha type-2-A | 0.07 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004298 | threonine-type endopeptidase activity | IEA | Interproscan |
CC | GO:0005839 | proteasome core complex | IEA | Interproscan |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
MF | GO:0005524 | ATP binding | IEP | Enrichment |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Enrichment |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
BP | GO:0009056 | catabolic process | IEP | Enrichment |
BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
BP | GO:0009987 | cellular process | IEP | Enrichment |
MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
CC | GO:0019867 | outer membrane | IEP | Enrichment |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
CC | GO:0031090 | organelle membrane | IEP | Enrichment |
CC | GO:0031966 | mitochondrial membrane | IEP | Enrichment |
CC | GO:0031968 | organelle outer membrane | IEP | Enrichment |
MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
MF | GO:0036094 | small molecule binding | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
MF | GO:0046983 | protein dimerization activity | IEP | Enrichment |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
CC | GO:0098588 | bounding membrane of organelle | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001353 | Proteasome_sua/b | 62 | 244 |
No external refs found! |