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  5. EOD39331

EOD39331


Description : Methylcrotonoyl-CoA carboxylase [Ensembl].


Gene families : OG_01_0000176 (OrthoFinder) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD39331
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000133.42 tig00000133_g7706.t1 Enzyme classification.EC_6 ligases.EC_6.4 ligase forming... 0.01 OrthoFinder
Cz13g10110.t1 No alias Carbamoyl-phosphate synthetase large subunit-like,... 0.01 OrthoFinder
OT_08G01000.1 No alias Pyruvate carboxyltransferase; Biotin carboxylase,... 0.01 OrthoFinder
Sro46_g027270.1 Contig1636.g14717 Pyruvate carboxylase 0.01 OrthoFinder
SymbC1.scaffold4.1639 4.1639 RNA polymerase sigma factor 54 interaction domain;... 0.01 OrthoFinder
XM_002503301.1 MICPUN_96455, 96455 Pyruvate carboyxlase (PYC) 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005542 folic acid binding IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0072341 modified amino acid binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR005482 Biotin_COase_C 373 455
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 168 321
IPR000089 Biotin_lipoyl 567 631
No external refs found!