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  5. EOD39276

EOD39276


Description : Polyketide synthase [Ensembl].


Gene families : OG_01_0000078 (OrthoFinder) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD39276
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
OT_02G00780.1 No alias Phosphopantetheine binding ACP domain; Polyketide... 0.02 OrthoFinder
SymbC1.scaffold396.11 396.11 Beta-ketoacyl synthase, C-terminal; Polyketide synthase,... 0.01 OrthoFinder
SymbC1.scaffold396.9 396.9 Beta-ketoacyl synthase, N-terminal; Polyketide synthase,... 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0007031 peroxisome organization IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR014031 Ketoacyl_synth_C 490 606
IPR014031 Ketoacyl_synth_C 1500 1613
IPR014031 Ketoacyl_synth_C 3122 3243
IPR009081 PP-bd_ACP 2777 2841
IPR009081 PP-bd_ACP 1165 1229
IPR009081 PP-bd_ACP 160 219
IPR001031 Thioesterase 3495 3582
IPR013968 PKS_KR 899 1076
IPR013968 PKS_KR 2505 2680
IPR014030 Ketoacyl_synth_N 2867 3108
IPR014030 Ketoacyl_synth_N 1260 1492
IPR014030 Ketoacyl_synth_N 249 482
IPR020807 PKS_dehydratase 1698 1940
IPR001242 Condensatn 4071 4199
No external refs found!