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  5. EOD38557

EOD38557


Description : Peptidase C2, calpain, catalytic domain; Zinc finger, GRF-type; Aprataxin and PNK-like factor, PBZ domain [Interproscan].


Gene families : OG_01_0000213 (OrthoFinder) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD38557
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold947.16 947.16 Peptidase C2, calpain, catalytic domain; EF-hand domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR001300 Peptidase_C2_calpain_cat 231 435
IPR010666 Znf_GRF 114 153
IPR019406 APLF_PBZ 456 483
No external refs found!