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  5. EOD38237

EOD38237


Description : Regulator of chromosome condensation [Ensembl].


Gene families : OG_01_0000246 (OrthoFinder) Phylogenetic Tree(s): OG0000246_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD38237
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
EOD29176 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.04 OrthoFinder
Sro1050_g235520.1 Contig1735.g15471 Domain of unknown function (DUF305) 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006788 heme oxidation IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 907 951
IPR000408 Reg_chr_condens 955 989
IPR000408 Reg_chr_condens 857 903
No external refs found!