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  5. EOD38024

EOD38024


Description : Alpha-tubulin [Ensembl].


Gene families : OG_01_0000699 (OrthoFinder) Phylogenetic Tree(s): OG0000699_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD38024
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000237.34 tig00000237_g20483.t1 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder
Cre03.g190950 30788226, TUA1 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.07 OrthoFinder
Cre04.g216850 30791599, TUA2 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.07 OrthoFinder
Cz11g05030.t1 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.02 OrthoFinder
EOD08306 No alias Alpha-tubulin [Ensembl]. 0.03 OrthoFinder
EOD12836 No alias Alpha-tubulin [Ensembl]. 0.03 OrthoFinder
EOD15554 No alias Alpha-tubulin [Ensembl]. 0.03 OrthoFinder
EOD22056 No alias Tubulin/FtsZ, 2-layer sandwich domain; Tubulin/FtsZ,... 0.04 OrthoFinder
EOD29196 No alias Alpha-tubulin [Ensembl]. 0.03 OrthoFinder
Sro102_g052160.1 Contig319.g4260 Tubulin alpha chain (Fragment) 0.01 OrthoFinder
Sro1718_g293350.1 Contig3856.g29683 Tubulin alpha chain (Fragment) 0.02 OrthoFinder
XM_002506021.1 MICPUN_92378, 92378 Alpha tubulin 1 (TUA1) 0.04 OrthoFinder
XM_003058575.1 MicpuC2_27021, 27021 Alpha tubulin (TUA1) 0.02 OrthoFinder
XM_003062454.1 MicpuC2_48630, 48630 Alpha tubulin (TUA2) 0.02 OrthoFinder
lcl|BLLF01000929.1_cds_GFH15979.1_10456 HaLaN_12318, GFH15979 Tubulin alpha chain 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 162 291
IPR003008 Tubulin_FtsZ_GTPase 7 112
No external refs found!