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  5. Cpa|evm.model.tig00021181.1

Cpa|evm.model.tig00021181.1 (tig00021181_g19305.t1)


Aliases : tig00021181_g19305.t1

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL19 component


Gene families : OG_01_0002658 (OrthoFinder) Phylogenetic Tree(s): OG0002658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021181.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cre02.g075700 30785746, RPL19 Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder
Cz11g15180.t1 No alias Ribosomal protein L19/L19e [Interproscan]. 0.18 OrthoFinder
Dusal.0530s00005.1 33203474 Ribosomal protein L19/L19e [Interproscan]. 0.17 OrthoFinder
OT_02G02430.1 No alias Ribosomal protein L19/L19e [Interproscan]. 0.26 OrthoFinder
PTI_21G02720.1 No alias Ribosomal protein L19/L19e; Chlorophyll A-B binding... 0.29 OrthoFinder
Sro734_g194640.1 Contig3769.g28942 60S ribosomal protein L19 0.37 OrthoFinder
SymbC1.scaffold3953.6 3953.6 Ribosomal protein L19/L19e [Interproscan]. 0.02 OrthoFinder
TP02G08540.1 No alias Ribosomal protein L19/L19e [Interproscan]. 0.09 OrthoFinder
Transcript_contig_90584 90584 Ribosomal protein L19/L19e [Interproscan]. 0.05 OrthoFinder
Vocar.0001s1683.1 32884888 Ribosomal protein L19/L19e [Interproscan]. 0.09 OrthoFinder
XM_002507605.1 MICPUN_112659, 112659 60S ribosomal protein L19 (RPL19) 0.25 OrthoFinder
XM_003055988.1 MicpuC2_49436, 49436 60S ribosomal protein L19 protein (RPL19) 0.03 OrthoFinder
lcl|BLLF01001946.1_cds_GFH21993.1_16470 HaLaN_19390, GFH21993 Ribosomal protein L19/L19e [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32846.1_3749 PRW32846 60S ribosomal L19-2 isoform A 0.19 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32847.1_3748 PRW32847 60S ribosomal L19-2 isoform B 0.05 OrthoFinder
lcl|VRMN01000017.1_cds_KAA8490961.1_6164 KAA8490961 60S ribosomal protein L19-2 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 4 146
No external refs found!