- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Bestrophin/UPF0187 [Interproscan].
Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD38010 | |
| Cluster | HCCA: Cluster_46 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| lcl|BLLF01000981.1_cds_GFH16336.1_10813 | HaLaN_12733, GFH16336 | Bestrophin/UPF0187 [Interproscan]. | 0.01 | OrthoFinder | |
| lcl|LHPG02000010.1_cds_PRW51063.1_920 | PRW51063 | UPF0187 chloroplastic | 0.02 | OrthoFinder | |
| lcl|LHPG02000016.1_cds_PRW33726.1_3376 | PRW33726 | UPF0187 chloroplastic | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0004089 | carbonate dehydratase activity | IEP | Enrichment |
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Enrichment |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
| MF | GO:0004650 | polygalacturonase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
| BP | GO:0006541 | glutamine metabolic process | IEP | Enrichment |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Enrichment |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Enrichment |
| BP | GO:0006665 | sphingolipid metabolic process | IEP | Enrichment |
| BP | GO:0006672 | ceramide metabolic process | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:0010181 | FMN binding | IEP | Enrichment |
| MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Enrichment |
| MF | GO:0015020 | glucuronosyltransferase activity | IEP | Enrichment |
| MF | GO:0016211 | ammonia ligase activity | IEP | Enrichment |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
| MF | GO:0016836 | hydro-lyase activity | IEP | Enrichment |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Enrichment |
| CC | GO:0032993 | protein-DNA complex | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| CC | GO:0044815 | DNA packaging complex | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021134 | Bestrophin/UPF0187 | 61 | 140 |
| No external refs found! |