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Description : Putative programmed cell death protein [Ensembl].
Gene families : OG_01_0001451 (OrthoFinder) Phylogenetic Tree(s): OG0001451_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD38000 | |
| Cluster | HCCA: Cluster_99 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020961.63 | tig00020961_g16685.t1 | No description available | 0.04 | OrthoFinder | |
| Cre03.g149500 | 30787433 | No description available | 0.06 | OrthoFinder | |
| Cz05g18100.t1 | No alias | Programmed cell death protein 2, C-terminal [Interproscan]. | 0.04 | OrthoFinder | |
| OT_10G02090.1 | No alias | Programmed cell death protein 2, C-terminal [Interproscan]. | 0.09 | OrthoFinder | |
| PTI_01G07170.1 | No alias | Programmed cell death protein 2, C-terminal [Interproscan]. | 0.08 | OrthoFinder | |
| Sro198_g084220.1 | Contig2317.g19142 | Programmed cell death protein 2, C-terminal [Interproscan]. | 0.09 | OrthoFinder | |
| Sro541_g163060.1 | Contig3996.g30671 | Hypothetical protein | 0.01 | OrthoFinder | |
| Vocar.0014s0103.1 | 32888558 | Programmed cell death protein 2, C-terminal [Interproscan]. | 0.04 | OrthoFinder | |
| XM_002503440.1 | MICPUN_59848, 59848 | Programmed cell death protein 2, C-terminal [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005737 | cytoplasm | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003724 | RNA helicase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007320 | PDCD2_C | 106 | 206 |
| No external refs found! |