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  5. EOD37794

EOD37794


Description : Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0003142 (OrthoFinder) Phylogenetic Tree(s): OG0003142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD37794
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.80 tig00020554_g10859.t1 Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder
Cre14.g610950 30776567 Protein degradation.26S proteasome.20S core... 0.16 OrthoFinder
Cz06g24010.t1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.09 OrthoFinder
Dusal.0079s00002.1 33199425 Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
PTI_05G01540.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.15 OrthoFinder
Sro236_g094920.1 Contig1410.g12930 Probable proteasome subunit beta type-4 0.18 OrthoFinder
TP09G01320.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.15 OrthoFinder
Transcript_contig_55472 55472 Proteasome, subunit alpha/beta [Interproscan]. 0.05 OrthoFinder
XM_002506282.1 MICPUN_109546, 109546 Proteasome, subunit alpha/beta [Interproscan]. 0.07 OrthoFinder
XM_003063267.1 MicpuC2_44925, 44925 Proteasome, subunit alpha/beta [Interproscan]. 0.08 OrthoFinder
lcl|BLLF01000939.1_cds_GFH16061.1_10538 HaLaN_12409, GFH16061 Proteasome subunit beta 0.08 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60170.1_6207 PRW60170 Proteasome subunit beta type-2-A 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016755 aminoacyltransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018199 peptidyl-glutamine modification IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 5 182
No external refs found!