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  5. EOD37777

EOD37777


Description : Multidrug resistance-associated protein, ABC superfamily [Ensembl].


Gene families : OG_01_0000039 (OrthoFinder) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD37777
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000718.2 tig00000718_g3679.t1 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000718.3 tig00000718_g3679.t1 ABC transporter C family member 6 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00001729.6 tig00001729_g9740.t1 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Cpa|evm.model.tig00020553.190 tig00020553_g10680.t1 ABC transporter C family member 4 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020553.191 tig00020553_g10681.t1 ABC transporter C family member 11 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020592.4 tig00020592_g11633.t1 ABC transporter C family member 1 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre02.g097800 30785105 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre07.g325761 30775279 ABC transporter C family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre13.g564900 30784450, MRP3 Solute transport.primary active transport.ABC... 0.04 OrthoFinder
Cz01g21260.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
Cz05g17060.t1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.07 OrthoFinder
EOD21147 No alias ABC transporter-like [Interproscan]. 0.02 OrthoFinder
PTI_03G04630.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
PTI_03G06590.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
Sro1322_g262550.1 Contig3764.g28905 Multiple drug resistance-associated protein-like transporter 1 0.06 OrthoFinder
Sro1659_g289200.1 Contig194.g2262 Oligomycin resistance ATP-dependent permease YOR1 0.01 OrthoFinder
Sro183_g079600.1 Contig3056.g24305 Multiple drug resistance-associated protein-like transporter 1 0.02 OrthoFinder
TP07G05800.1 No alias ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
Transcript_contig_56405 56405 ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
Vocar.0028s0030.1 32895600 ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
XM_002508173.1 MICPUN_94915, 94915 ATP-binding cassette superfamily 0.06 OrthoFinder
XM_003055793.1 MicpuC2_55005, 55005 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_003055794.1 MicpuC2_55006, 55006 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|BLLF01000184.1_cds_GFH08792.1_3269 HaLaN_03816, GFH08792 ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
lcl|BLLF01003175.1_cds_GFH26596.1_21073 HaLaN_24770, GFH26596 ABC transporter type 1, transmembrane domain; ABC... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004359 glutaminase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
BP GO:0019725 cellular homeostasis IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0042816 vitamin B6 metabolic process IEP Enrichment
BP GO:0042819 vitamin B6 biosynthetic process IEP Enrichment
BP GO:0042822 pyridoxal phosphate metabolic process IEP Enrichment
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046184 aldehyde biosynthetic process IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 21 176
No external refs found!