EOD37157

Description : Chromo domain; Helicase, C-terminal; SNF2-related, N-terminal domain [Interproscan].

Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD37157

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000983.26	tig00000983_g5915.t1	RNA biosynthesis.RNA polymerase II-dependent...	0.02	OrthoFinder
Cpa\|evm.model.tig00020960.24	tig00020960_g16545.t1	Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cz19g07040.t1	No alias	Helicase, C-terminal; SNF2-related, N-terminal domain;...	0.01	OrthoFinder
Dusal.0357s00004.1	33189829	SNF2-related, N-terminal domain; Helicase, C-terminal;...	0.01	OrthoFinder
Dusal.0752s00002.1	33199466	Domain of unknown function DUF3535; SNF2-related,...	0.01	OrthoFinder
EOD36557	No alias	SNF2-related, N-terminal domain [Interproscan].	0.06	OrthoFinder
Sro125_g060200.1	Contig2833.g22731	Chromodomain-helicase-DNA-binding protein	0.01	OrthoFinder
Sro1796_g298120.1	Contig441.g5925	Probable chromatin-remodeling complex ATPase chain	0.02	OrthoFinder
Sro264_g102660.1	Contig921.g9692	Probable chromatin-remodeling complex ATPase chain	0.02	OrthoFinder
Sro2_g001340.1	Contig467.g6292	CHD3-type chromatin-remodeling factor PICKLE	0.02	OrthoFinder
lcl\|BLLF01000629.1_cds_GFH13581.1_8058	HaLaN_09499, GFH13581	SNF2-related, N-terminal domain [Interproscan].	0.02	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8498955.1_7908	KAA8498955	SWI/SNF chromatin-remodeling complex subunit snf22	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR023780	Chromo_domain	212	260
IPR001650	Helicase_C	610	720
IPR000330	SNF2_N	318	598

External Links

No external refs found!