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  5. Cpa|evm.model.tig00021168.60

Cpa|evm.model.tig00021168.60 (tig00021168_g19126.t1)


Aliases : tig00021168_g19126.t1

Description : Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 OS=Arabidopsis thaliana


Gene families : OG_01_0000314 (OrthoFinder) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021168.60
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Cre03.g199350 30787807 Chromatin organisation.chromatin remodeling... 0.01 OrthoFinder
EOD13647 No alias DNA topoisomerase, type IA, zn finger; HNH endonuclease;... 0.02 OrthoFinder
UNPLg00208.t1 No alias Helicase, C-terminal [Interproscan]. 0.02 OrthoFinder
UNPLg00628.t1 No alias SNF2-related, N-terminal domain [Interproscan]. 0.03 OrthoFinder
Vocar.0022s0055.1 32891835 Helicase, C-terminal [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001162.1_cds_GFH17531.1_12008 HaLaN_14189, GFH17531 Helicase C-terminal domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44334.1_2413 PRW44334 DNA annealing helicase and endonuclease ZRANB3 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005885 Arp2/3 protein complex IEP Enrichment
BP GO:0007015 actin filament organization IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
BP GO:0010638 positive regulation of organelle organization IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030838 positive regulation of actin filament polymerization IEP Enrichment
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032273 positive regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044089 positive regulation of cellular component biogenesis IEP Enrichment
BP GO:0045010 actin nucleation IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051495 positive regulation of cytoskeleton organization IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
BP GO:0097435 supramolecular fiber organization IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR000330 SNF2_N 179 403
No external refs found!