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  5. EOD36388

EOD36388


Description : WD40 repeat; Small-subunit processome, Utp12 [Interproscan].


Gene families : OG_01_0003352 (OrthoFinder) Phylogenetic Tree(s): OG0003352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD36388
Cluster HCCA: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
Cre06.g254150 30779221, UTP1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder
OT_02G02250.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0001733 galactosylceramide sulfotransferase activity IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005794 Golgi apparatus IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
MF GO:0050694 galactose 3-O-sulfotransferase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 384 419
IPR001680 WD40_repeat 89 116
IPR001680 WD40_repeat 346 378
IPR001680 WD40_repeat 138 170
IPR001680 WD40_repeat 522 552
IPR007148 SSU_processome_Utp12 752 856
No external refs found!