EOD36317

Description : Putative histone H2B [Ensembl].

Gene families : OG_01_0000102 (OrthoFinder) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD36317
Cluster	HCCA: Cluster_72

Target	Alias	Description	ECC score	Gene Family Method
Cre06.g265400	30779197	Chromatin organisation.histones.H2B-type histone	0.02	OrthoFinder
Cre06.g268250	30778807, HTB9	Chromatin organisation.histones.H2B-type histone	0.01	OrthoFinder
Cre12.g504550	30792324	Chromatin organisation.histones.H2B-type histone	0.02	OrthoFinder
Cre17.g708600	30782289, HTB20	Chromatin organisation.histones.H2B-type histone	0.01	OrthoFinder
XM_002508058.1	MICPUN_101755, 101755	Histone H2B	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Enrichment
MF	GO:0004518	nuclease activity	IEP	Enrichment
MF	GO:0004519	endonuclease activity	IEP	Enrichment
MF	GO:0004521	endoribonuclease activity	IEP	Enrichment
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Enrichment
MF	GO:0004540	ribonuclease activity	IEP	Enrichment
MF	GO:0005543	phospholipid binding	IEP	Enrichment
MF	GO:0008146	sulfotransferase activity	IEP	Enrichment
MF	GO:0008270	zinc ion binding	IEP	Enrichment
MF	GO:0008289	lipid binding	IEP	Enrichment
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Enrichment
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Enrichment
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Enrichment
BP	GO:0018208	peptidyl-proline modification	IEP	Enrichment
MF	GO:0035091	phosphatidylinositol binding	IEP	Enrichment
MF	GO:0043167	ion binding	IEP	Enrichment
MF	GO:0043169	cation binding	IEP	Enrichment
MF	GO:0046872	metal ion binding	IEP	Enrichment
MF	GO:0046914	transition metal ion binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	5	94

External Links

No external refs found!