1. Home
  2. Species
  3. Emiliania huxleyi
  4. Sequence
  5. EOD36303

EOD36303


Description : Helicase, C-terminal; DEAD/DEAH box helicase domain [Interproscan].


Gene families : OG_01_0000107 (OrthoFinder) Phylogenetic Tree(s): OG0000107_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD36303
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000789.41 tig00000789_g4134.t1 ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre04.g219750 30791451 Cell cycle.mitosis and meiosis.meiotic... 0.02 OrthoFinder
Cre12.g490150 30793094 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz01g28020.t1 No alias ATP-dependent DNA helicase RecQ, zinc-binding domain;... 0.03 OrthoFinder
Cz02g03170.t1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain;... 0.03 OrthoFinder
Cz12g21050.t1 No alias ATP-dependent DNA helicase RecQ, zinc-binding domain;... 0.01 OrthoFinder
Dusal.0020s00028.1 33193689 Helicase, C-terminal; RQC domain; ATP-dependent DNA... 0.02 OrthoFinder
Dusal.0209s00011.1 33199677 Helicase, C-terminal; ATP-dependent DNA helicase RecQ,... 0.03 OrthoFinder
Dusal.0407s00008.1 33197886 Zinc finger, CCHC-type; Helicase, C-terminal [Interproscan]. 0.02 OrthoFinder
OT_03G01700.1 No alias Helicase, C-terminal; RQC domain; ATP-dependent DNA... 0.04 OrthoFinder
OT_04G00490.1 No alias DEAD/DEAH box helicase domain; HRDC domain; Helicase,... 0.03 OrthoFinder
OT_05G04280.1 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.06 OrthoFinder
PTI_01G08380.1 No alias Helicase, C-terminal; ATP-dependent DNA helicase RecQ,... 0.02 OrthoFinder
Sro108_g054090.1 Contig2294.g18989 Syndrome ATP-dependent helicase homolog 0.02 OrthoFinder
Sro2203_g318940.1 Contig3463.g26860 Bloom syndrome protein homolog 0.03 OrthoFinder
Sro408_g136820.1 Contig3193.g25217 Probable Werner syndrome ATP-dependent helicase homolog 1 0.05 OrthoFinder
Sro83_g044440.1 Contig4450.g33418 Syndrome ATP-dependent helicase homolog 0.04 OrthoFinder
Sro9_g007280.1 Contig4120.g31496 Probable Werner syndrome ATP-dependent helicase homolog 1 0.04 OrthoFinder
XM_002502498.1 MICPUN_50295, 50295 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.07 OrthoFinder
XM_002504646.1 MICPUN_66235, 66235 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
XM_003055181.1 MicpuC2_12297, 12297 Helicase, C-terminal; ATP-dependent DNA helicase RecQ,... 0.02 OrthoFinder
XM_003056852.1 MicpuC2_636, 636 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006471 protein ADP-ribosylation IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019239 deaminase activity IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 18 191
IPR001650 Helicase_C 228 320
No external refs found!