EOD35905

Description : Sec23/Sec24 beta-sandwich; Sec23/Sec24, trunk domain [Interproscan].

Gene families : OG_01_0000893 (OrthoFinder) Phylogenetic Tree(s): OG0000893_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EOD35905
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
Cre01.g035850	30788608, SEC24B	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.02	OrthoFinder
Sro1952_g307420.1	Contig4337.g32706	Transport protein SEC24	0.02	OrthoFinder
Transcript_contig_58293	58293	Sec23/Sec24 beta-sandwich; Sec23/Sec24, trunk domain;...	0.01	OrthoFinder
Vocar.0001s0725.1	32884529	Sec23/Sec24, trunk domain; Sec23/Sec24, helical domain;...	0.02	OrthoFinder
XM_003055317.1	MicpuC2_49909, 49909	Sec23/Sec24 beta-sandwich; Sec23/Sec24, helical domain;...	0.01	OrthoFinder
XM_003061771.1	MicpuC2_28751, 28751	Gelsolin-like domain; Sec23/Sec24, helical domain;...	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030127	COPII vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000030	mannosyltransferase activity	IEP	Enrichment
MF	GO:0005244	voltage-gated ion channel activity	IEP	Enrichment
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Enrichment
MF	GO:0005253	anion channel activity	IEP	Enrichment
MF	GO:0005254	chloride channel activity	IEP	Enrichment
MF	GO:0005543	phospholipid binding	IEP	Enrichment
CC	GO:0005777	peroxisome	IEP	Enrichment
BP	GO:0006493	protein O-linked glycosylation	IEP	Enrichment
BP	GO:0006821	chloride transport	IEP	Enrichment
BP	GO:0007031	peroxisome organization	IEP	Enrichment
MF	GO:0008308	voltage-gated anion channel activity	IEP	Enrichment
BP	GO:0009058	biosynthetic process	IEP	Enrichment
BP	GO:0009187	cyclic nucleotide metabolic process	IEP	Enrichment
BP	GO:0009190	cyclic nucleotide biosynthetic process	IEP	Enrichment
MF	GO:0015267	channel activity	IEP	Enrichment
MF	GO:0016787	hydrolase activity	IEP	Enrichment
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Enrichment
MF	GO:0022803	passive transmembrane transporter activity	IEP	Enrichment
MF	GO:0022832	voltage-gated channel activity	IEP	Enrichment
MF	GO:0035091	phosphatidylinositol binding	IEP	Enrichment
CC	GO:0042579	microbody	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR012990	Sec23_24_beta_S	58	131
IPR006896	Sec23/24_trunk_dom	1	51

External Links

No external refs found!