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  5. EOD35878

EOD35878


Description : Light harvesting protein [Ensembl].


Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD35878
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Cre08.g365900 30773702, LHCSR1 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder
Sro132_g062570.1 Contig2745.g22100 Chloroplastic 0.01 OrthoFinder
Sro1347_g264950.1 Contig4640.g34581 B binding protein 6, chloroplastic 0.02 OrthoFinder
Sro1430_g271970.1 Contig4579.g34184 B binding protein L1818, chloroplastic 0.03 OrthoFinder
Sro1506_g278310.1 Contig3888.g29862 Chloroplastic 0.02 OrthoFinder
Sro2423_g327210.1 Contig3569.g27581 Chloroplastic 0.03 OrthoFinder
Sro412_g137900.1 Contig2922.g23262 Chloroplastic 0.03 OrthoFinder
Sro60_g034620.1 Contig797.g8939 Chloroplastic 0.02 OrthoFinder
Sro652_g181650.1 Contig2024.g17318 Chloroplastic 0.02 OrthoFinder
Sro656_g182410.1 Contig256.g3152 Chloroplastic 0.02 OrthoFinder
Sro698_g189300.1 Contig480.g6500 Chlorophyll a 0.02 OrthoFinder
Sro698_g189330.1 Contig480.g6503 Chloroplastic 0.02 OrthoFinder
Sro829_g208070.1 Contig1016.g10166 Chloroplastic 0.02 OrthoFinder
Sro844_g209920.1 Contig403.g5457 Chloroplastic 0.03 OrthoFinder
TP23G01280.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016849 phosphorus-oxygen lyase activity IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 60 226
No external refs found!