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Description : Polyketide synthase [Ensembl].
Gene families : OG_01_0000078 (OrthoFinder) Phylogenetic Tree(s): OG0000078_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD35802 | |
| Cluster | HCCA: Cluster_196 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SymbC1.scaffold396.11 | 396.11 | Beta-ketoacyl synthase, C-terminal; Polyketide synthase,... | 0.01 | OrthoFinder | |
| SymbC1.scaffold396.9 | 396.9 | Beta-ketoacyl synthase, N-terminal; Polyketide synthase,... | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | Interproscan |
| BP | GO:0009058 | biosynthetic process | IEA | Interproscan |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003968 | RNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0004061 | arylformamidase activity | IEP | Enrichment |
| MF | GO:0005216 | ion channel activity | IEP | Enrichment |
| MF | GO:0005244 | voltage-gated ion channel activity | IEP | Enrichment |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Enrichment |
| MF | GO:0005253 | anion channel activity | IEP | Enrichment |
| MF | GO:0005254 | chloride channel activity | IEP | Enrichment |
| CC | GO:0005777 | peroxisome | IEP | Enrichment |
| BP | GO:0006568 | tryptophan metabolic process | IEP | Enrichment |
| BP | GO:0006569 | tryptophan catabolic process | IEP | Enrichment |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Enrichment |
| BP | GO:0006586 | indolalkylamine metabolic process | IEP | Enrichment |
| BP | GO:0006821 | chloride transport | IEP | Enrichment |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Enrichment |
| BP | GO:0007031 | peroxisome organization | IEP | Enrichment |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | Enrichment |
| BP | GO:0009063 | cellular amino acid catabolic process | IEP | Enrichment |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Enrichment |
| BP | GO:0009074 | aromatic amino acid family catabolic process | IEP | Enrichment |
| BP | GO:0009308 | amine metabolic process | IEP | Enrichment |
| BP | GO:0009310 | amine catabolic process | IEP | Enrichment |
| MF | GO:0015267 | channel activity | IEP | Enrichment |
| BP | GO:0016054 | organic acid catabolic process | IEP | Enrichment |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Enrichment |
| BP | GO:0019441 | tryptophan catabolic process to kynurenine | IEP | Enrichment |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Enrichment |
| CC | GO:0030120 | vesicle coat | IEP | Enrichment |
| CC | GO:0030127 | COPII vesicle coat | IEP | Enrichment |
| BP | GO:0042180 | cellular ketone metabolic process | IEP | Enrichment |
| BP | GO:0042402 | cellular biogenic amine catabolic process | IEP | Enrichment |
| BP | GO:0042430 | indole-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0042436 | indole-containing compound catabolic process | IEP | Enrichment |
| BP | GO:0042537 | benzene-containing compound metabolic process | IEP | Enrichment |
| CC | GO:0042579 | microbody | IEP | Enrichment |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Enrichment |
| BP | GO:0044282 | small molecule catabolic process | IEP | Enrichment |
| BP | GO:0046218 | indolalkylamine catabolic process | IEP | Enrichment |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | Enrichment |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Enrichment |
| BP | GO:0070189 | kynurenine metabolic process | IEP | Enrichment |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR014030 | Ketoacyl_synth_N | 827 | 1071 |
| IPR014030 | Ketoacyl_synth_N | 2454 | 2694 |
| IPR014030 | Ketoacyl_synth_N | 4079 | 4319 |
| IPR014030 | Ketoacyl_synth_N | 5705 | 5945 |
| IPR009081 | PP-bd_ACP | 748 | 801 |
| IPR009081 | PP-bd_ACP | 3981 | 4037 |
| IPR009081 | PP-bd_ACP | 5601 | 5663 |
| IPR009081 | PP-bd_ACP | 2356 | 2412 |
| IPR009081 | PP-bd_ACP | 6645 | 6696 |
| IPR014031 | Ketoacyl_synth_C | 5958 | 6071 |
| IPR014031 | Ketoacyl_synth_C | 2707 | 2820 |
| IPR014031 | Ketoacyl_synth_C | 4332 | 4445 |
| IPR014031 | Ketoacyl_synth_C | 1083 | 1192 |
| IPR001031 | Thioesterase | 7061 | 7160 |
| IPR020807 | PKS_dehydratase | 1311 | 1558 |
| IPR020807 | PKS_dehydratase | 2906 | 3183 |
| IPR020807 | PKS_dehydratase | 4531 | 4811 |
| IPR000873 | AMP-dep_Synth/Lig | 64 | 466 |
| IPR013968 | PKS_KR | 2084 | 2262 |
| IPR013968 | PKS_KR | 5338 | 5514 |
| IPR013968 | PKS_KR | 6367 | 6549 |
| IPR013968 | PKS_KR | 3709 | 3887 |
| No external refs found! |