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  5. EOD34248

EOD34248


Description : Vps4 oligomerisation, C-terminal; AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core [Interproscan].


Gene families : OG_01_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD34248
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
Cre01.g022000 30788870 ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder
Cz03g25090.t1 No alias ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
OT_15G01910.1 No alias AAA ATPase, AAA+ lid domain; Vps4 oligomerisation,... 0.07 OrthoFinder
OT_15G01930.1 No alias ATPase, AAA-type, core [Interproscan]. 0.07 OrthoFinder
Sro1909_g304840.1 Contig4171.g31813 Fidgetin-like protein 1 0.02 OrthoFinder
Transcript_contig_54972 54972 MIT; ATPase, AAA-type, core; Vps4 oligomerisation,... 0.01 OrthoFinder
Transcript_contig_56032 56032 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain... 0.02 OrthoFinder
Vocar.0045s0039.1 32887800 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.02 OrthoFinder
XM_002505303.1 MICPUN_86677, 86677 AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006471 protein ADP-ribosylation IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 46 176
IPR041569 AAA_lid_3 202 228
IPR015415 Vps4_C 248 283
No external refs found!