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  5. Cpa|evm.model.tig00021127.76

Cpa|evm.model.tig00021127.76 (tig00021127_g18753.t1)


Aliases : tig00021127_g18753.t1

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021127.76
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Cre11.g476250 30775659 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
EOD17424 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold75.16 75.16 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold8380.1 8380.1 Phox homologous domain; Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45336.1_1274 PRW45336 E3 ubiquitin-ligase SDIR1 isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 27 69
No external refs found!