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  5. EOD34009

EOD34009


Description : Putative actin [Ensembl].


Gene families : OG_01_0000106 (OrthoFinder) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD34009
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001408.21 tig00001408_g8615.t1 Actin-related protein 6 OS=Oryza sativa subsp. indica 0.01 OrthoFinder
EOD14371 No alias Putative actin [Ensembl]. 0.03 OrthoFinder
EOD28113 No alias Putative actin [Ensembl]. 0.05 OrthoFinder
EOD32510 No alias Actin family [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR004000 Actin 4 376
No external refs found!