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Description : Zinc finger, C3HC4 type (RING finger) [Interproscan].
Gene families : OG_01_0000463 (OrthoFinder) Phylogenetic Tree(s): OG0000463_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD33930 | |
| Cluster | HCCA: Cluster_160 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021094.27 | tig00021094_g18112.t1 | No description available | 0.01 | OrthoFinder | |
| OT_17G00630.1 | No alias | Zinc finger, C3HC4 type (RING finger) [Interproscan]. | 0.01 | OrthoFinder | |
| SymbC1.scaffold2415.2 | 2415.2 | Zinc finger, C3HC4 type (RING finger) [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_90354 | 90354 | Hypothetical protein | 0.01 | OrthoFinder | |
| lcl|VRMN01000013.1_cds_KAA8491442.1_6252 | KAA8491442 | Putative E3 ubiquitin-protein ligase LUL3 | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000105 | histidine biosynthetic process | IEP | Enrichment |
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| BP | GO:0003352 | regulation of cilium movement | IEP | Enrichment |
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Enrichment |
| MF | GO:0004399 | histidinol dehydrogenase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Enrichment |
| BP | GO:0005991 | trehalose metabolic process | IEP | Enrichment |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Enrichment |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Enrichment |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
| BP | GO:0006547 | histidine metabolic process | IEP | Enrichment |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Enrichment |
| MF | GO:0008483 | transaminase activity | IEP | Enrichment |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009058 | biosynthetic process | IEP | Enrichment |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
| BP | GO:0016570 | histone modification | IEP | Enrichment |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Enrichment |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Enrichment |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Enrichment |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Enrichment |
| CC | GO:0017119 | Golgi transport complex | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0032879 | regulation of localization | IEP | Enrichment |
| BP | GO:0032886 | regulation of microtubule-based process | IEP | Enrichment |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Enrichment |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Enrichment |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0051270 | regulation of cellular component movement | IEP | Enrichment |
| MF | GO:0051287 | NAD binding | IEP | Enrichment |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Enrichment |
| MF | GO:0051540 | metal cluster binding | IEP | Enrichment |
| BP | GO:0060632 | regulation of microtubule-based movement | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| CC | GO:0099023 | vesicle tethering complex | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |