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  5. Cpa|evm.model.tig00021127.40

Cpa|evm.model.tig00021127.40 (tig00021127_g18717.t1)


Aliases : tig00021127_g18717.t1

Description : Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor


Gene families : OG_01_0001139 (OrthoFinder) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021127.40
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cre06.g259150 30779657, EFG8 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
Sro362_g126720.1 Contig50.g354 Elongation factor Tu, chloroplastic (Fragment) 0.01 OrthoFinder
SymbC1.scaffold1.1374 1.1374 Ribosomal protein L1/ribosomal biogenesis protein;... 0.01 OrthoFinder
TPCG02790.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.01 OrthoFinder
Transcript_contig_55899 55899 Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
XM_003056817.1 MicpuC2_32374, 32374 Translation elongation factor EFTu-like, domain 2;... 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56031.1_10254 PRW56031 Elongation factor mitochondrial 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0005542 folic acid binding IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006570 tyrosine metabolic process IEP Enrichment
BP GO:0006571 tyrosine biosynthetic process IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0019211 phosphatase activator activity IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0072341 modified amino acid binding IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 268 344
IPR000795 T_Tr_GTP-bd_dom 51 244
IPR004160 Transl_elong_EFTu/EF1A_C 381 423
No external refs found!