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Description : 26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1 [Interproscan].
Gene families : OG_01_0003515 (OrthoFinder) Phylogenetic Tree(s): OG0003515_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD33243 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000615.75 | tig00000615_g2605.t1 | Protein degradation.26S proteasome.regulatory... | 0.04 | OrthoFinder | |
| Cre13.g581450 | 30784003, RPN7 | Protein degradation.26S proteasome.regulatory... | 0.09 | OrthoFinder | |
| Cz08g26110.t1 | No alias | 26S proteasome regulatory subunit Rpn7/COP9 signalosome... | 0.04 | OrthoFinder | |
| OT_09G02120.1 | No alias | Proteasome component (PCI) domain; 26S proteasome... | 0.05 | OrthoFinder | |
| PTI_02G06010.1 | No alias | 26S proteasome regulatory subunit Rpn7/COP9 signalosome... | 0.06 | OrthoFinder | |
| Sro2134_g315960.1 | Contig2353.g19341 | ATPase regulatory subunit 6 | 0.07 | OrthoFinder | |
| TP05G01650.1 | No alias | Proteasome component (PCI) domain; 26S proteasome... | 0.04 | OrthoFinder | |
| Transcript_contig_89237 | 89237 | Proteasome component (PCI) domain; 26S proteasome... | 0.02 | OrthoFinder | |
| XM_002508764.1 | MICPUN_109050, 109050 | Proteasome component (PCI) domain; 26S proteasome... | 0.04 | OrthoFinder | |
| XM_003056762.1 | MicpuC2_44063, 44063 | 26S proteasome regulatory subunit Rpn7/COP9 signalosome... | 0.02 | OrthoFinder | |
| lcl|BLLF01001077.1_cds_GFH16965.1_11442 | HaLaN_13491, GFH16965 | PCI domain-containing protein | 0.01 | OrthoFinder | |
| lcl|LHPG02000002.1_cds_PRW60726.1_4407 | PRW60726 | 26S proteasome non-ATPase regulatory subunit 6-like protein | 0.07 | OrthoFinder | |
| lcl|VRMN01000002.1_cds_KAA8496364.1_93 | KAA8496364 | 26S proteasome non-ATPase regulatory subunit 6-like | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0004827 | proline-tRNA ligase activity | IEP | Enrichment |
| MF | GO:0005049 | nuclear export signal receptor activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005737 | cytoplasm | IEP | Enrichment |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
| BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
| BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016874 | ligase activity | IEP | Enrichment |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
| CC | GO:0030117 | membrane coat | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0043038 | amino acid activation | IEP | Enrichment |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
| BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
| MF | GO:0046983 | protein dimerization activity | IEP | Enrichment |
| MF | GO:0051082 | unfolded protein binding | IEP | Enrichment |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
| MF | GO:0140104 | molecular carrier activity | IEP | Enrichment |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Enrichment |
| MF | GO:0140597 | protein carrier activity | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019585 | Rpn7/CSN1 | 146 | 218 |
| No external refs found! |