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  5. Cpa|evm.model.tig00021127.182

Cpa|evm.model.tig00021127.182 (tig00021127_g18866.t1)


Aliases : tig00021127_g18866.t1

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.C-class RAB GTPase


Gene families : OG_01_0000215 (OrthoFinder) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021127.182
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Cre12.g560150 30793394 Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder
Cre15.g641800 30783722 GTP-binding protein yptV2 OS=Volvox carteri 0.02 OrthoFinder
EOD04048 No alias Rab family GTPase [Ensembl]. 0.02 OrthoFinder
EOD34679 No alias Ras-related protein [Ensembl]. 0.04 OrthoFinder
EOD40734 No alias Rab8, rab family GTPase [Ensembl]. 0.01 OrthoFinder
Sro1231_g254630.1 Contig4451.g33439 Ras-related protein Rab 0.01 OrthoFinder
TP02G08940.1 No alias Small GTPase [Interproscan]. 0.02 OrthoFinder
TP03G05300.1 No alias Small GTPase [Interproscan]. 0.01 OrthoFinder
TP05G05610.1 No alias Small GTPase [Interproscan]. 0.01 OrthoFinder
Vocar.0033s0060.1 32886318 Small GTPase [Interproscan]. 0.02 OrthoFinder
XM_002499443.1 MICPUN_90086, 90086 Ras-related gtp-binding protein 0.02 OrthoFinder
XM_002502050.1 MICPUN_81389, 81389 Small GTPase [Interproscan]. 0.01 OrthoFinder
XM_003055674.1 MicpuC2_31102, 31102 Small GTPase [Interproscan]. 0.06 OrthoFinder
XM_003057331.1 MicpuC2_49521, 49521 Small GTPase [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000038.1_cds_GFH06421.1_898 HaLaN_01048, GFH06421 GTP-binding protein YPTC1 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60039.1_6259 PRW60039 Rab family GTPase 0.03 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58406.1_8120 PRW58406 Rab8-family small GTPase 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497981.1_6934 KAA8497981 Ras-related protein RABC2a 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005929 cilium IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
CC GO:0031514 motile cilium IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
CC GO:0120025 plasma membrane bounded cell projection IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001806 Small_GTPase 11 168
No external refs found!