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Aliases : tig00021127_g18826.t1
Description : Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate synthase
Gene families : OG_01_0001950 (OrthoFinder) Phylogenetic Tree(s): OG0001950_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00021127.145 | |
| Cluster | HCCA: Cluster_118 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro1532_g280270.1 | Contig2041.g17540 | 3-dehydroquinate synthase | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004000 | adenosine deaminase activity | IEP | Enrichment |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Enrichment |
| MF | GO:0004107 | chorismate synthase activity | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008685 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity | IEP | Enrichment |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Enrichment |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
| BP | GO:0009451 | RNA modification | IEP | Enrichment |
| MF | GO:0010309 | acireductone dioxygenase [iron(II)-requiring] activity | IEP | Enrichment |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Enrichment |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Enrichment |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Enrichment |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Enrichment |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
| MF | GO:0016829 | lyase activity | IEP | Enrichment |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Enrichment |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Enrichment |
| MF | GO:0016849 | phosphorus-oxygen lyase activity | IEP | Enrichment |
| MF | GO:0019239 | deaminase activity | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR030960 | DHQS/DOIS | 173 | 432 |
| No external refs found! |