EOD32710


Description : Putative actin [Ensembl].


Gene families : OG_01_0000106 (OrthoFinder) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD32710
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021350.36 tig00021350_g20654.t1 Cytoskeleton.microfilament network.actin filament protein 0.03 OrthoFinder
Dusal.0038s00017.1 33192343 Actin family [Interproscan]. 0.02 OrthoFinder
Dusal.0175s00014.1 33199727 Actin family [Interproscan]. 0.01 OrthoFinder
EOD30003 No alias Putative actin [Ensembl]. 0.03 OrthoFinder
EOD36123 No alias Putative actin [Ensembl]. 0.03 OrthoFinder
lcl|BLLF01000050.1_cds_GFH06670.1_1147 HaLaN_01339, GFH06670 Actin family [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000731.1_cds_GFH14486.1_8963 HaLaN_10550, GFH14486 Actin-like protein arp-6 0.01 OrthoFinder
lcl|BLLF01002459.1_cds_GFH24159.1_18636 HaLaN_21895, GFH24159 Actin family [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01004671.1_cds_GFH30038.1_24515 HaLaN_28811, GFH30038 Actin family [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0004017 adenylate kinase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0005092 GDP-dissociation inhibitor activity IEP Enrichment
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Enrichment
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Enrichment
MF GO:0018580 nitronate monooxygenase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
MF GO:0050145 nucleoside monophosphate kinase activity IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR004000 Actin 4 376
No external refs found!