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Description : Putative actin [Ensembl].
Gene families : OG_01_0000106 (OrthoFinder) Phylogenetic Tree(s): OG0000106_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD32710 | |
| Cluster | HCCA: Cluster_252 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021350.36 | tig00021350_g20654.t1 | Cytoskeleton.microfilament network.actin filament protein | 0.03 | OrthoFinder | |
| Dusal.0038s00017.1 | 33192343 | Actin family [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0175s00014.1 | 33199727 | Actin family [Interproscan]. | 0.01 | OrthoFinder | |
| EOD30003 | No alias | Putative actin [Ensembl]. | 0.03 | OrthoFinder | |
| EOD36123 | No alias | Putative actin [Ensembl]. | 0.03 | OrthoFinder | |
| lcl|BLLF01000050.1_cds_GFH06670.1_1147 | HaLaN_01339, GFH06670 | Actin family [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01000731.1_cds_GFH14486.1_8963 | HaLaN_10550, GFH14486 | Actin-like protein arp-6 | 0.01 | OrthoFinder | |
| lcl|BLLF01002459.1_cds_GFH24159.1_18636 | HaLaN_21895, GFH24159 | Actin family [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01004671.1_cds_GFH30038.1_24515 | HaLaN_28811, GFH30038 | Actin family [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0004017 | adenylate kinase activity | IEP | Enrichment |
| MF | GO:0004497 | monooxygenase activity | IEP | Enrichment |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Enrichment |
| MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Enrichment |
| MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006996 | organelle organization | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Enrichment |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Enrichment |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Enrichment |
| MF | GO:0018580 | nitronate monooxygenase activity | IEP | Enrichment |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Enrichment |
| MF | GO:0030695 | GTPase regulator activity | IEP | Enrichment |
| CC | GO:0032993 | protein-DNA complex | IEP | Enrichment |
| BP | GO:0043631 | RNA polyadenylation | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| CC | GO:0044815 | DNA packaging complex | IEP | Enrichment |
| MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Enrichment |
| BP | GO:0051259 | protein complex oligomerization | IEP | Enrichment |
| BP | GO:0051260 | protein homooligomerization | IEP | Enrichment |
| BP | GO:0051276 | chromosome organization | IEP | Enrichment |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Enrichment |
| BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004000 | Actin | 4 | 376 |
| No external refs found! |