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Description : Actin family [Interproscan].
Gene families : OG_01_0000106 (OrthoFinder) Phylogenetic Tree(s): OG0000106_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD32708 | |
| Cluster | HCCA: ConcentricCluster_252 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021350.36 | tig00021350_g20654.t1 | Cytoskeleton.microfilament network.actin filament protein | 0.02 | OrthoFinder | |
| Cre08.g382590 | 30773758 | Actin-related protein 6 OS=Oryza sativa subsp. indica | 0.02 | OrthoFinder | |
| Dusal.0038s00017.1 | 33192343 | Actin family [Interproscan]. | 0.03 | OrthoFinder | |
| Dusal.0175s00014.1 | 33199727 | Actin family [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0810s00001.1 | 33198558 | Actin family [Interproscan]. | 0.01 | OrthoFinder | |
| EOD14371 | No alias | Putative actin [Ensembl]. | 0.03 | OrthoFinder | |
| TP22G02480.1 | No alias | Actin family [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01000050.1_cds_GFH06670.1_1147 | HaLaN_01339, GFH06670 | Actin family [Interproscan]. | 0.03 | OrthoFinder | |
| lcl|LHPG02000003.1_cds_PRW59601.1_6691 | PRW59601 | Actin | 0.02 | OrthoFinder | |
| lcl|LHPG02000021.1_cds_PRW20870.1_5108 | PRW20870 | Actin-related 4 | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Enrichment |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0004017 | adenylate kinase activity | IEP | Enrichment |
| MF | GO:0004497 | monooxygenase activity | IEP | Enrichment |
| MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Enrichment |
| MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006605 | protein targeting | IEP | Enrichment |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Enrichment |
| MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Enrichment |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0018580 | nitronate monooxygenase activity | IEP | Enrichment |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Enrichment |
| BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
| BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Enrichment |
| BP | GO:0051276 | chromosome organization | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004000 | Actin | 4 | 376 |
| No external refs found! |