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  5. EOD32345

EOD32345


Description : Regulator of chromosome condensation, RCC1 [Interproscan].


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD32345
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.12 tig00000711_g3373.t1 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00020875.8 tig00020875_g14885.t1 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00021318.63 tig00021318_g20183.t1 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.01 OrthoFinder
OT_10G01050.1 No alias Brevis radix (BRX) domain; Regulator of chromosome... 0.03 OrthoFinder
Transcript_contig_58480 58480 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
MF GO:0008373 sialyltransferase activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 301 350
IPR000408 Reg_chr_condens 456 486
IPR000408 Reg_chr_condens 353 402
IPR000408 Reg_chr_condens 405 453
IPR000408 Reg_chr_condens 199 242
IPR000408 Reg_chr_condens 249 298
No external refs found!