Description : Ubiquitin-like domain; Ribosomal protein S27a [Interproscan].
Gene families : OG_01_0000054 (OrthoFinder) Phylogenetic Tree(s): OG0000054_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EOD32212 | |
Cluster | HCCA: Cluster_106 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00022075.50 | tig00022075_g23611.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.1 | OrthoFinder | |
Cre01.g007051 | 30788581 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.1 | OrthoFinder | |
Cre06.g273600 | 30779902, RPS27a | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.31 | OrthoFinder | |
Cz09g22150.t1 | No alias | Ribosomal protein S27a [Interproscan]. | 0.26 | OrthoFinder | |
Cz13g16210.t1 | No alias | Ubiquitin-like domain [Interproscan]. | 0.09 | OrthoFinder | |
Dusal.0222s00011.1 | 33201848 | Ribosomal protein S27a; Ubiquitin-like domain [Interproscan]. | 0.1 | OrthoFinder | |
Dusal.0519s00002.1 | 33200370 | Ubiquitin-like domain [Interproscan]. | 0.03 | OrthoFinder | |
Dusal.0808s00008.1 | 33188936 | Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. | 0.01 | OrthoFinder | |
Dusal.0814s00004.1 | 33191920 | Ubiquitin-associated domain; Ubiquitin-like domain... | 0.02 | OrthoFinder | |
OT_07G00910.1 | No alias | Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. | 0.12 | OrthoFinder | |
OT_08G01740.1 | No alias | Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. | 0.18 | OrthoFinder | |
PTI_07G02070.1 | No alias | Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. | 0.22 | OrthoFinder | |
Sro305_g112730.1 | Contig560.g7114 | Polyubiquitin (Fragment) | 0.24 | OrthoFinder | |
Sro490_g153470.1 | Contig328.g4367 | Polyubiquitin (Fragment) | 0.31 | OrthoFinder | |
TP05G02210.1 | No alias | Ubiquitin-like domain; Ribosomal protein S27a [Interproscan]. | 0.32 | OrthoFinder | |
Transcript_contig_90271 | 90271 | Ubiquitin-like domain [Interproscan]. | 0.01 | OrthoFinder | |
Vocar.0002s0346.1 | 32890766 | Ribosomal protein S27a; Ubiquitin-like domain [Interproscan]. | 0.14 | OrthoFinder | |
Vocar.0009s0373.1 | 32893174 | Ubiquitin-like domain [Interproscan]. | 0.04 | OrthoFinder | |
Vocar.0024s0156.1 | 32890529 | Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. | 0.09 | OrthoFinder | |
Vocar.0031s0093.1 | 32890066 | Ubiquitin-like domain [Interproscan]. | 0.02 | OrthoFinder | |
XM_002501154.1 | MICPUN_90428, 90428 | Ribosomal protein S27a; Ubiquitin-like domain [Interproscan]. | 0.26 | OrthoFinder | |
XM_002503017.1 | MICPUN_82590, 82590 | Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. | 0.16 | OrthoFinder | |
XM_003058637.1 | MicpuC2_17541, 17541 | Ribosomal protein L40e; Ubiquitin-like domain [Interproscan]. | 0.07 | OrthoFinder | |
lcl|LHPG02000002.1_cds_PRW60289.1_4387 | PRW60289 | Ubiquitin-40S ribosomal S27a | 0.12 | OrthoFinder | |
lcl|LHPG02000008.1_cds_PRW56465.1_9834 | PRW56465 | Ubiquitin-60S ribosomal L40 | 0.18 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8497057.1_786 | KAA8497057 | Ubiquitin-like protein 1-40S ribosomal protein S27a | 0.12 | OrthoFinder | |
lcl|VRMN01000006.1_cds_KAA8493558.1_4320 | KAA8493558 | Ubiquitin-60S ribosomal protein L40-2 | 0.15 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
BP | GO:0006413 | translational initiation | IEP | Enrichment |
CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
BP | GO:0071569 | protein ufmylation | IEP | Enrichment |
No external refs found! |