EOD31760


Description : RNA recognition motif domain [Interproscan].


Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD31760
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020553.146 tig00020553_g10637.t1 Serine/arginine-rich splicing factor SR45a... 0.02 OrthoFinder
Cpa|evm.model.tig00021433.15 tig00021433_g21269.t1 No description available 0.01 OrthoFinder
Cre06.g288750 30780037, CBP20 No description available 0.01 OrthoFinder
OT_04G03540.1 No alias RNA recognition motif domain; Zinc finger, CCCH-type... 0.01 OrthoFinder
OT_05G03560.1 No alias RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
PTI_02G03010.1 No alias Cleavage stimulation factor subunit 2, hinge domain; RNA... 0.01 OrthoFinder
PTI_08G03190.1 No alias RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_3626 3626 RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000067.1_cds_GFH06980.1_1457 HaLaN_01711, GFH06980 RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01001633.1_cds_GFH20431.1_14908 HaLaN_17551, GFH20431 Ribonucleoprotein, chloroplastic 0.01 OrthoFinder
lcl|BLLF01003010.1_cds_GFH26067.1_20544 HaLaN_24152, GFH26067 RNA recognition motif domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
BP GO:0051260 protein homooligomerization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 11 81
No external refs found!