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Description : RecF/RecN/SMC, N-terminal [Interproscan].
Gene families : OG_01_0001971 (OrthoFinder) Phylogenetic Tree(s): OG0001971_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EOD30555 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000711.41 | tig00000711_g3404.t1 | Cell cycle.mitosis and meiosis.chromatin... | 0.03 | OrthoFinder | |
| OT_06G01300.1 | No alias | RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. | 0.04 | OrthoFinder | |
| PTI_03G05440.1 | No alias | RecF/RecN/SMC, N-terminal; SMCs flexible hinge [Interproscan]. | 0.02 | OrthoFinder | |
| Sro1170_g248720.1 | Contig3531.g27301 | Structural maintenance of chromosomes protein 4 (Fragment) | 0.02 | OrthoFinder | |
| lcl|LHPG02000007.1_cds_PRW57046.1_8805 | PRW57046 | Structural maintenance of chromosomes 4 | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003682 | chromatin binding | IEP | Enrichment |
| MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | Enrichment |
| MF | GO:0004497 | monooxygenase activity | IEP | Enrichment |
| MF | GO:0004565 | beta-galactosidase activity | IEP | Enrichment |
| BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
| BP | GO:0006325 | chromatin organization | IEP | Enrichment |
| BP | GO:0006338 | chromatin remodeling | IEP | Enrichment |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Enrichment |
| CC | GO:0009341 | beta-galactosidase complex | IEP | Enrichment |
| MF | GO:0015925 | galactosidase activity | IEP | Enrichment |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Enrichment |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Enrichment |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Enrichment |
| MF | GO:0018580 | nitronate monooxygenase activity | IEP | Enrichment |
| MF | GO:0019207 | kinase regulator activity | IEP | Enrichment |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Enrichment |
| MF | GO:0031491 | nucleosome binding | IEP | Enrichment |
| CC | GO:0032993 | protein-DNA complex | IEP | Enrichment |
| BP | GO:0043044 | ATP-dependent chromatin remodeling | IEP | Enrichment |
| CC | GO:0044815 | DNA packaging complex | IEP | Enrichment |
| MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003395 | RecF/RecN/SMC_N | 1 | 62 |
| No external refs found! |