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  5. EOD30282

EOD30282


Description : Bestrophin/UPF0187 [Interproscan].


Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD30282
Cluster HCCA: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Cre11.g474700 30775620 Solute transport.channels.VCCN chloride anion channel 0.02 OrthoFinder
Cz02g16180.t1 No alias Bestrophin/UPF0187 [Interproscan]. 0.03 OrthoFinder
Dusal.0033s00019.1 33202482 Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
Sro1890_g303730.1 Contig981.g9967 UPF0187 protein 0.01 OrthoFinder
Sro659_g182830.1 Contig2136.g17991 UPF0187 protein 0.02 OrthoFinder
TP04G07800.1 No alias Bestrophin/UPF0187 [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33726.1_3376 PRW33726 UPF0187 chloroplastic 0.03 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493711.1_4473 KAA8493711 UPF0187 protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
BP GO:0000255 allantoin metabolic process IEP Enrichment
BP GO:0000256 allantoin catabolic process IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
CC GO:0008290 F-actin capping protein complex IEP Enrichment
BP GO:0010639 negative regulation of organelle organization IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016842 amidine-lyase activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030834 regulation of actin filament depolymerization IEP Enrichment
BP GO:0030835 negative regulation of actin filament depolymerization IEP Enrichment
BP GO:0030837 negative regulation of actin filament polymerization IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0031333 negative regulation of protein-containing complex assembly IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032272 negative regulation of protein polymerization IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043244 regulation of protein-containing complex disassembly IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0043605 cellular amide catabolic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
MF GO:0050385 ureidoglycolate lyase activity IEP Enrichment
BP GO:0051016 barbed-end actin filament capping IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051129 negative regulation of cellular component organization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051494 negative regulation of cytoskeleton organization IEP Enrichment
BP GO:0051693 actin filament capping IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901879 regulation of protein depolymerization IEP Enrichment
BP GO:1901880 negative regulation of protein depolymerization IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR021134 Bestrophin/UPF0187 11 139
No external refs found!