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  5. Cpa|evm.model.tig00000157.125

Cpa|evm.model.tig00000157.125 (tig00000157_g9728.t1)


Aliases : tig00000157_g9728.t1

Description : RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor


Gene families : OG_01_0002118 (OrthoFinder) Phylogenetic Tree(s): OG0002118_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000157.125
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001304.7 tig00001304_g8109.t1 RNA biosynthesis.organelle... 0.04 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497196.1_925 KAA8497196 Transcription termination factor MTEF1, chloroplastic 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
CC GO:0005891 voltage-gated calcium channel complex IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
CC GO:0034703 cation channel complex IEP Enrichment
CC GO:0034704 calcium channel complex IEP Enrichment
CC GO:0036128 CatSper complex IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR003690 MTERF 151 228
No external refs found!