Description : Ribosomal protein S11 [Interproscan].
Gene families : OG_01_0000909 (OrthoFinder) Phylogenetic Tree(s): OG0000909_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: EOD30026 | |
Cluster | HCCA: Cluster_214 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre06.g288400 | 30779477, MRPS11 | 30S ribosomal protein S11, chloroplastic OS=Chlorella vulgaris | 0.05 | OrthoFinder | |
Cre12.g493950 | 30792612, PRPS13 | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder | |
OT_03G05840.1 | No alias | Ribosomal protein S13 [Interproscan]. | 0.02 | OrthoFinder | |
Sro51_chlor_g029670.1 | Rps13 | Rps13 | 0.03 | OrthoFinder | |
Sro51_chlor_g029680.1 | Rps11 | Rps11 | 0.03 | OrthoFinder | |
Sro884_mit_g215880.1 | Rps13 | Rps13 | 0.03 | OrthoFinder | |
XM_002506993.1 | MICPUN_89270, 89270 | Ribosomal protein S13, chloroplast precursor (RPS13) | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000347 | THO complex | IEP | Enrichment |
CC | GO:0000445 | THO complex part of transcription export complex | IEP | Enrichment |
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
CC | GO:0005667 | transcription regulator complex | IEP | Enrichment |
CC | GO:0005739 | mitochondrion | IEP | Enrichment |
CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
BP | GO:0006397 | mRNA processing | IEP | Enrichment |
BP | GO:0006508 | proteolysis | IEP | Enrichment |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Enrichment |
MF | GO:0008233 | peptidase activity | IEP | Enrichment |
BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Enrichment |
MF | GO:0016831 | carboxy-lyase activity | IEP | Enrichment |
MF | GO:0019843 | rRNA binding | IEP | Enrichment |
CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
MF | GO:0046983 | protein dimerization activity | IEP | Enrichment |
BP | GO:0048193 | Golgi vesicle transport | IEP | Enrichment |
BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001971 | Ribosomal_S11 | 69 | 180 |
No external refs found! |