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  5. EOD29856

EOD29856


Description : Light harvesting protein [Ensembl].


Gene families : OG_01_0000059 (OrthoFinder) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD29856
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
EOD28786 No alias Light harvesting protein [Ensembl]. 0.09 OrthoFinder
PTI_02G00650.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
PTI_02G00660.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
PTI_02G00670.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_02G00680.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
PTI_03G05650.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_15G01940.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.07 OrthoFinder
PTI_15G03790.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
PTI_17G01330.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
PTI_19G00440.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
PTI_20G01250.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
PTI_24G01550.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
PTI_24G01720.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
Sro1043_g234820.1 Contig3084.g24573 Fucoxanthin-chlorophyll a-c binding protein 0.09 OrthoFinder
Sro125_g060100.1 Contig2833.g22721 Fucoxanthin-chlorophyll a-c binding protein 0.05 OrthoFinder
Sro1292_g260030.1 Contig3668.g28344 Fucoxanthin-chlorophyll a-c binding protein 0.03 OrthoFinder
Sro1292_g260040.1 Contig3668.g28345 Fucoxanthin-chlorophyll a-c binding protein 0.07 OrthoFinder
Sro137_g064500.1 Contig3969.g30465 Fucoxanthin-chlorophyll a-c binding protein 0.08 OrthoFinder
Sro1418_g271000.1 Contig4752.g35216 Fucoxanthin-chlorophyll a-c binding protein 0.05 OrthoFinder
Sro1451_g273830.1 Contig4314.g32534 Fucoxanthin-chlorophyll a-c binding protein 0.07 OrthoFinder
Sro147_g067990.1 Contig246.g3022 Chloroplastic 0.07 OrthoFinder
Sro2004_g310410.1 Contig2826.g22657 Fucoxanthin-chlorophyll a-c binding protein 0.06 OrthoFinder
Sro2330_g323570.1 Contig817.g9103 Fucoxanthin-chlorophyll a-c binding protein 0.08 OrthoFinder
Sro238_g095650.1 Contig99.g1211 Fucoxanthin-chlorophyll a-c binding protein 0.07 OrthoFinder
Sro267_g103520.1 Contig4506.g33814 Fucoxanthin-chlorophyll a-c binding protein 0.07 OrthoFinder
Sro267_g103540.1 Contig4506.g33816 Fucoxanthin-chlorophyll a-c binding protein 0.06 OrthoFinder
Sro2721_g335500.1 Contig3512.g27204 Fucoxanthin-chlorophyll a-c binding protein 0.08 OrthoFinder
Sro31_g020150.1 Contig420.g5610 Fucoxanthin-chlorophyll a-c binding protein A, chloroplastic 0.07 OrthoFinder
Sro326_g118250.1 Contig1080.g10513 Fucoxanthin-chlorophyll a-c binding protein 0.08 OrthoFinder
Sro367_g127810.1 Contig623.g7606 Fucoxanthin-chlorophyll a-c binding protein 0.07 OrthoFinder
Sro376_g129680.1 Contig3640.g28118 Fucoxanthin-chlorophyll a-c binding protein 0.04 OrthoFinder
Sro43_g026030.1 Contig2453.g20069 Fucoxanthin-chlorophyll a-c binding protein 0.07 OrthoFinder
Sro518_g158860.1 Contig3565.g27541 Chloroplastic 0.07 OrthoFinder
Sro533_g161680.1 Contig3819.g29336 Fucoxanthin-chlorophyll a-c binding protein 0.09 OrthoFinder
Sro566_g167740.1 Contig3739.g28669 Fucoxanthin-chlorophyll a-c binding protein 0.05 OrthoFinder
Sro6_g005380.1 Contig175.g2043 Fucoxanthin-chlorophyll a-c binding protein 0.08 OrthoFinder
Sro6_g005400.1 Contig175.g2045 Fucoxanthin-chlorophyll a-c binding protein 0.05 OrthoFinder
Sro720_g192680.1 Contig2421.g19829 Fucoxanthin-chlorophyll a-c binding protein 0.06 OrthoFinder
Sro773_g200470.1 Contig1379.g12690 Fucoxanthin-chlorophyll a-c binding protein 0.07 OrthoFinder
Sro7_g006410.1 Contig389.g5294 Fucoxanthin-chlorophyll a-c binding protein 0.06 OrthoFinder
Sro823_g207590.1 Contig3379.g26446 Fucoxanthin-chlorophyll a-c binding protein 0.05 OrthoFinder
Sro851_g210830.1 Contig461.g6209 Chloroplastic 0.02 OrthoFinder
SymbC1.scaffold13463.1 13463.1 Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold1704.4 1704.4 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold2422.8 2422.8 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold3115.7 3115.7 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold5549.3 5549.3 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold5801.6 5801.6 Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold75.5 75.5 Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
TP01G10180.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
TP02G08060.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
TP03G01950.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
TP03G01960.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
TP05G02100.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
TP20G01530.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
TP20G01560.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
TP22G01060.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder
TP22G02570.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 36 182
No external refs found!