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  5. EOD29689

EOD29689


Description : Oxoglutarate/iron-dependent dioxygenase; Cold-shock protein, DNA-binding [Interproscan].


Gene families : OG_01_0000009 (OrthoFinder) Phylogenetic Tree(s): OG0000009_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EOD29689
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Cz03g05260.t1 No alias Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.01 OrthoFinder
OT_07G01790.1 No alias Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.02 OrthoFinder
OT_15G02370.1 No alias Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.01 OrthoFinder
TP09G01550.1 No alias Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01005056.1_cds_GFH30670.1_25147 HaLaN_29560, GFH30670 Fe2OG dioxygenase domain-containing protein 0.01 OrthoFinder
lcl|BLLF01005564.1_cds_GFH31359.1_25836 HaLaN_30388, GFH31359 Fe2OG dioxygenase domain-containing protein 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW33032.1_3821 PRW33032 Putative prolyl 4-hydroxylase 4 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0001401 SAM complex IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098799 outer mitochondrial membrane protein complex IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR002059 CSP_DNA-bd 150 214
IPR005123 Oxoglu/Fe-dep_dioxygenase 394 494
No external refs found!